Welcome to the chaste_codegen documentation¶
chaste_codegen is hosted on GitHub, where you can find the code and installation instructions.
This page provides the API, or developer documentation for chaste_codegen
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API documentation¶
chaste_codegen Package¶
Main module for cardiac Chaste code generation
Functions¶
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Loads a template from the local template directory. |
Substitutes the placeholder math functions in expr for their corresponding Sympy functions :param expr: sympy expression |
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Returns the version number, as a 3-part integer (major, minor, revision). |
Classes¶
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Holds template and information specific for the Backwards Euler model type |
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Holds information specific for the Optimised Backward Euler model type. |
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Holds information about a cellml model for which chaste code is to be generated. |
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Converts Sympy expressions to strings for use in Chaste code generation. |
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Holds template and information specific for the CVODE model type |
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Holds template and information specific for the GeneralisedRushLarsen model type |
Holds template and information specific for the GeneralisedRushLarsenOpt model type |
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Holds template and information specific for the GeneralisedRushLarsen model type |
Holds template and information specific for the GeneralisedRushLarsenOpt model type |
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Converts Sympy expressions to strings for use in Chaste code generation. |
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Holds template and information specific for the Normal model type |
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Holds information specific for the Optimised model type. |
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Holds information specific for the Cvode Optimised model type. |
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Holds template and information specific for the RushLarsen model type |
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Holds template and information specific for the RushLarsen model type |
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Holds template and information specific for the RushLarsen model type |
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Holds template and information specific for the RushLarsen model type |
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Handles conversion of MathmL to Sympy exprerssions. |
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